 'gb0.300t.relax.out' - output file
  2 - number of chemical species in the system ( <= 4) 
 'Al'  26.98 - element and atomic weight
 'Ti'  47.90 - element and atomic weight
 '/nfs/tmp1/caturla/b.hyde/dianas.code/tial/pal.dat'
 '/nfs/tmp1/caturla/b.hyde/dianas.code/tial/palti.dat'
 '/nfs/tmp1/caturla/b.hyde/dianas.code/tial/pti.dat'
 '/nfs/tmp1/caturla/b.hyde/dianas.code/tial/for022.dat'
 '/nfs/tmp1/caturla/b.hyde/dianas.code/tial/fti.dat'
 '/nfs/tmp1/caturla/b.hyde/dianas.code/tial/fral.dat'
 '/nfs/tmp1/caturla/b.hyde/dianas.code/tial/frti.dat'
 0 - nonzero to generate a structure, zero to restart a run
 'gb0.300t.plt'
 'def.dat' - input file for lattice defects
 1.0 1.0 1.0 0.0 0.0  -initial deformation factors
 0 - minimization mode
 'none' - input file for minimization parameters, or 'none'
 'gb0.300t.relax.plt' - save final configuration in this file 
 'none' - input file for static crack simulations
 'none' - input file for dynamic crack simulations
 'dynshear.md' - input file for md simulations
