Micro and Nano Mechanics Group
Revision as of 22:01, 14 February 2009 by Caiwei (Talk)

VASP: Ideal Shear Strength of Au


Contents

Input files

Here are the basic input files required for VASP calculation. Some of the files need to be changed since we need to perform a large number of calculations.

INCAR

System = fcc Au
LWAVE = .FALSE.
ENCUT  =  400
ISMEAR  = 1
SIGMA = 0.2
ISIF = 2

To increase plane wave cutoff, we manually put PREC = HIGH or PREC = Accurate. Default value is PREC = Medium

KPOINTS

43x43x43
0        0 = automatic generation of k-points
Monkhorst
43 43 43
0 0 0

POSCAR

POSCAR for FCC Au (created by tcl)
4.0615
 0.612372435696  0.000000000000 -0.353553390593
 0.408248290464  0.577350269190  0.000000000000
 0.612372435696  0.000000000000  0.353553390593
1
Cartesian  (real coordinates r)
0    0    0

You also need to put the LDA pseudopotential file as POTCAR in this directory.

Results

Perfect crystal

First, we perform a test simulation in which we relax the electrons in a gold perfect crystal.

 qsub vasp.pbs

The vasp.pbs script is listed below.

#!/bin/bash
#PBS -N Au_perf.43.E4.8
#PBS -j oe
#PBS -l nodes=1:ppn=8,walltime=24:00:00
#PBS -V

### ---------------------------------------
### BEGINNING OF EXECUTION
### ---------------------------------------

echo The master node of this job is `hostname`
echo The working directory is `echo $PBS_O_WORKDIR`
echo This job runs on the following nodes:
echo `cat $PBS_NODEFILE`

ncpu=`cat $PBS_NODEFILE | wc -w`
echo "Number of processors = $ncpu "

### end of information preamble

cd $PBS_O_WORKDIR
echo $PWD
/opt/mpiexec/bin/mpiexec --comm=pmi -np $ncpu ../../../../bin/vasp.caiwei.mva2 >& $PBS_O_WORKDIR/vasp.log

We run this test case on SU-AHPCRC. The calculation takes 160 seconds (on 8 CPUs) to finish. The ground state energy is E = -4.3951 eV.

Shear deformation

 qsub tcl.pbs