How to install Moose - Revision history

Yanmingw: /* MOOSE GUI */

2017-06-13T21:50:53Z

MOOSE GUI

← Older revision		Revision as of 21:50, 13 June 2017
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	peacock -i your_input_file.i		peacock -i your_input_file.i

	For ~~more~~ detailed instructions, please refer to http://mooseframework.org/wiki/Peacock/.		For detailed instructions, please refer to http://mooseframework.org/wiki/Peacock/.

Yanmingw: /* MOOSE GUI */

2017-06-13T21:50:40Z

MOOSE GUI

← Older revision		Revision as of 21:50, 13 June 2017
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	peacock		peacock

	And you can run a simulation with it as ~~well~~.		And you can run a simulation with it from there.

	cd ~/projects/trunk/<your application directory>/<your test directory>		cd ~/projects/trunk/<your application directory>/<your test directory>

Yanmingw: /* MOOSE GUI */

2017-06-13T21:49:42Z

MOOSE GUI

← Older revision		Revision as of 21:49, 13 June 2017
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	== MOOSE GUI ==		== MOOSE GUI ==
	Unfortunately, we ~~cannot~~ ~~use~~ Peacock on a cluster, but you are still able to use it to visualize your data or do some simple tests locally (e.g. on your Macbook). Assuming you are using a Mac OS, you can add the following line in your '''~/.bash_profile''' to add Peacock to your PATH.		Unfortunately, there are some issues about using Peacock on a cluster, but you are still able to use it to visualize your data or do some simple tests locally (e.g. on your Macbook). Assuming you are using a Mac OS, you can add the following line in your '''~/.bash_profile''' to add Peacock to your PATH.

	export PATH=~/projects/moose/gui:$PATH		export PATH=~/projects/moose/gui:$PATH

Yanmingw: /* MOOSE Installation on Mac */

2017-06-13T21:47:38Z

MOOSE Installation on Mac

← Older revision		Revision as of 21:47, 13 June 2017
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	== MOOSE Installation on Mac ==		== MOOSE Installation on Mac ==
	~~Install~~ MOOSE on Mac is straightforward. You can simply follow the below instructions online.		Installing MOOSE on Mac is straightforward. You can simply follow the below instructions online.
	http://mooseframework.org/getting-started/osx/		http://mooseframework.org/getting-started/osx/

Yanmingw at 21:47, 13 June 2017

2017-06-13T21:47:20Z

← Older revision		Revision as of 21:47, 13 June 2017
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	If you download the data and open them by Peacock, you expect to observe the 3D grain structures similar to what shown below.		If you download the data and open them by Peacock, you expect to observe the 3D grain structures similar to what shown below.
	[[Image: Grain_structure_moose.png \| Grain structure]]		[[Image: Grain_structure_moose.png \| Grain structure]]

			== MOOSE Installation on Mac ==
			Install MOOSE on Mac is straightforward. You can simply follow the below instructions online.
			http://mooseframework.org/getting-started/osx/

			== MOOSE GUI ==
			Unfortunately, we cannot use Peacock on a cluster, but you are still able to use it to visualize your data or do some simple tests locally (e.g. on your Macbook). Assuming you are using a Mac OS, you can add the following line in your '''~/.bash_profile''' to add Peacock to your PATH.

			export PATH=~/projects/moose/gui:$PATH

			Notice that you need to open Peacock in a directory that has your application's executable.

			cd ~/projects/<your application directory>
			peacock

			And you can run a simulation with it as well.

			cd ~/projects/trunk/<your application directory>/<your test directory>
			peacock -i your_input_file.i

			For more detailed instructions, please refer to http://mooseframework.org/wiki/Peacock/.

Yanmingw: /* Phase field module */

2017-06-13T21:32:42Z

Phase field module

← Older revision		Revision as of 21:32, 13 June 2017
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	The results are saved in a series of files in .exodus format, which can be opened by Paraview, or [http://mooseframework.org/wiki/Peacock/ Peacock] (a GUI provided by MOOSE but not compatible with Certainty).		The results are saved in a series of files in .exodus format, which can be opened by Paraview, or [http://mooseframework.org/wiki/Peacock/ Peacock] (a GUI provided by MOOSE but not compatible with Certainty).

	If you download ~~them~~ and open them, you expect to observe the 3D grain structures similar to what shown below.		If you download the data and open them by Peacock, you expect to observe the 3D grain structures similar to what shown below.
	[[Image: Grain_structure_moose.png \| Grain structure]]		[[Image: Grain_structure_moose.png \| Grain structure]]

Yanmingw at 21:32, 13 June 2017

2017-06-13T21:32:13Z

← Older revision		Revision as of 21:32, 13 June 2017
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	qsub phasefield_test_Moose.pbs		qsub phasefield_test_Moose.pbs

	The results are saved in ~~the~~ .exodus format, which can be opened by Paraview, or [http://mooseframework.org/wiki/Peacock/ Peacock] (a GUI provided by MOOSE but not compatible with Certainty).		The results are saved in a series of files in .exodus format, which can be opened by Paraview, or [http://mooseframework.org/wiki/Peacock/ Peacock] (a GUI provided by MOOSE but not compatible with Certainty).

			If you download them and open them, you expect to observe the 3D grain structures similar to what shown below.
			[[Image: Grain_structure_moose.png \| Grain structure]]

Yanmingw: /* Phase field module */

2017-06-13T21:26:01Z

Phase field module

← Older revision		Revision as of 21:26, 13 June 2017
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	../../phase_field-opt -i grain_growth_3D.i		../../phase_field-opt -i grain_growth_3D.i

	Alternatively, you can submit the job to Certainty using this sample pbs script[[Media:Phasefield_test_Moose.pbs.txt \| ~~Phasefield_test_Moose~~.pbs]].		Alternatively, you can submit the job to Certainty using this sample pbs script[[Media:Phasefield_test_Moose.pbs.txt \| phasefield_test_Moose.pbs]].
	cd ~/projects/moose/modules/phase_field/examples/grain_growth		cd ~/projects/moose/modules/phase_field/examples/grain_growth
	qsub phasefield_test_Moose.pbs		qsub phasefield_test_Moose.pbs

Yanmingw: /* Phase field module */

2017-06-13T21:25:49Z

Phase field module

← Older revision		Revision as of 21:25, 13 June 2017
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	Alternatively, you can submit the job to Certainty using this sample pbs script[[Media:Phasefield_test_Moose.pbs.txt \| Phasefield_test_Moose.pbs]].		Alternatively, you can submit the job to Certainty using this sample pbs script[[Media:Phasefield_test_Moose.pbs.txt \| Phasefield_test_Moose.pbs]].
	cd ~/projects/moose/modules/phase_field/examples/grain_growth		cd ~/projects/moose/modules/phase_field/examples/grain_growth
	qsub ~~Media:Phasefield_test_Moose~~.pbs		qsub phasefield_test_Moose.pbs

	The results are saved in the .exodus format, which can be opened by Paraview, or [http://mooseframework.org/wiki/Peacock/ Peacock] (a GUI provided by MOOSE but not compatible with Certainty).		The results are saved in the .exodus format, which can be opened by Paraview, or [http://mooseframework.org/wiki/Peacock/ Peacock] (a GUI provided by MOOSE but not compatible with Certainty).

Yanmingw: /* Phase field module */

2017-06-13T21:25:30Z

Phase field module

← Older revision		Revision as of 21:25, 13 June 2017
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	make		make

	If the compilation is successful, you expect to get the executable '''phase_field-opt'''. You can do a simple ~~test on~~ 3D grain growth.		If the compilation is successful, you expect to get the executable '''phase_field-opt'''. You can do a simple 3D grain growth simulation interactively.

	cd ~/projects/moose/modules/phase_field/examples/grain_growth		cd ~/projects/moose/modules/phase_field/examples/grain_growth
	../../phase_field-opt -i grain_growth_3D.i		../../phase_field-opt -i grain_growth_3D.i

	[[Media:Phasefield_test_Moose.pbs.txt \| ~~example~~ pbs ~~file~~]]		Alternatively, you can submit the job to Certainty using this sample pbs script[[Media:Phasefield_test_Moose.pbs.txt \| Phasefield_test_Moose.pbs]].
			cd ~/projects/moose/modules/phase_field/examples/grain_growth
			qsub Media:Phasefield_test_Moose.pbs

	The results are saved in the .exodus format, which can be opened by Paraview, or [http://mooseframework.org/wiki/Peacock/ Peacock] (a GUI provided by MOOSE but not compatible with Certainty).		The results are saved in the .exodus format, which can be opened by Paraview, or [http://mooseframework.org/wiki/Peacock/ Peacock] (a GUI provided by MOOSE but not compatible with Certainty).