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	<id>http://micro.stanford.edu/mediawiki/index.php?action=history&amp;feed=atom&amp;title=DDLab_Input_Consistency_Check</id>
	<title>DDLab Input Consistency Check - Revision history</title>
	<link rel="self" type="application/atom+xml" href="http://micro.stanford.edu/mediawiki/index.php?action=history&amp;feed=atom&amp;title=DDLab_Input_Consistency_Check"/>
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	<updated>2026-07-05T19:22:03Z</updated>
	<subtitle>Revision history for this page on the wiki</subtitle>
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	<entry>
		<id>http://micro.stanford.edu/mediawiki/index.php?title=DDLab_Input_Consistency_Check&amp;diff=694&amp;oldid=prev</id>
		<title>Caiwei at 22:27, 18 December 2007</title>
		<link rel="alternate" type="text/html" href="http://micro.stanford.edu/mediawiki/index.php?title=DDLab_Input_Consistency_Check&amp;diff=694&amp;oldid=prev"/>
		<updated>2007-12-18T22:27:25Z</updated>

		<summary type="html">&lt;p&gt;&lt;/p&gt;
&lt;table style=&quot;background-color: #fff; color: #202122;&quot; data-mw=&quot;interface&quot;&gt;
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				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;← Older revision&lt;/td&gt;
				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;Revision as of 22:27, 18 December 2007&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;
  &lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 1:&lt;/td&gt;
  &lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 1:&lt;/td&gt;
&lt;/tr&gt;
&lt;tr&gt;
  &lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;
  &lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;DDLab has a function &amp;lt;tt&amp;gt;consistencycheck.m&amp;lt;/tt&amp;gt; that checks the self-consistency of the input dislocation structure before starting the DD simulation.  The function &amp;lt;tt&amp;gt;consistencycheck.m&amp;lt;/tt&amp;gt; is called near the very beginning of &amp;lt;tt&amp;gt;dd3d.m&amp;lt;/tt&amp;gt;&lt;/div&gt;&lt;/td&gt;
  &lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;
  &lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;DDLab has a function &amp;lt;tt&amp;gt;consistencycheck.m&amp;lt;/tt&amp;gt; that checks the self-consistency of the input dislocation structure before starting the DD simulation.  The function &amp;lt;tt&amp;gt;consistencycheck.m&amp;lt;/tt&amp;gt; is called near the very beginning of &amp;lt;tt&amp;gt;dd3d.m&amp;lt;/tt&amp;gt;&lt;/div&gt;&lt;/td&gt;
&lt;/tr&gt;
&lt;tr&gt;
  &lt;td colspan=&quot;2&quot; class=&quot;diff-empty diff-side-deleted&quot;&gt;&lt;/td&gt;
  &lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;
  &lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br /&gt;&lt;/td&gt;
&lt;/tr&gt;
&lt;tr&gt;
  &lt;td colspan=&quot;2&quot; class=&quot;diff-empty diff-side-deleted&quot;&gt;&lt;/td&gt;
  &lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;
  &lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;This function checks not only the input structures &amp;lt;tt&amp;gt;rn&amp;lt;/tt&amp;gt; and &amp;lt;tt&amp;gt;links&amp;lt;/tt&amp;gt; but also the auxiliary data structures &amp;lt;tt&amp;gt;connectivity&amp;lt;/tt&amp;gt; and &amp;lt;tt&amp;gt;linksinconnect&amp;lt;/tt&amp;gt;, which are created by function &amp;lt;tt&amp;gt;genconnectivity.m&amp;lt;/tt&amp;gt;.&lt;/div&gt;&lt;/td&gt;
&lt;/tr&gt;
&lt;tr&gt;
  &lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;
  &lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br /&gt;&lt;/td&gt;
  &lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;
  &lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br /&gt;&lt;/td&gt;
&lt;/tr&gt;
&lt;tr&gt;
  &lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;
  &lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;In the version &amp;lt;tt&amp;gt;ddlab-2007-12-18.tar.gz&amp;lt;/tt&amp;gt; or newer, the &amp;lt;tt&amp;gt;consistencycheck.m&amp;lt;/tt&amp;gt; does the following checks.  Items 3, 4, 5 are general checks that are in principle necessary for any DD simulation program.  Other items are specific to the DDLab data structure and algorithm implementation.&lt;/div&gt;&lt;/td&gt;
  &lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;
  &lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;In the version &amp;lt;tt&amp;gt;ddlab-2007-12-18.tar.gz&amp;lt;/tt&amp;gt; or newer, the &amp;lt;tt&amp;gt;consistencycheck.m&amp;lt;/tt&amp;gt; does the following checks.  Items 3, 4, 5 are general checks that are in principle necessary for any DD simulation program.  Other items are specific to the DDLab data structure and algorithm implementation.&lt;/div&gt;&lt;/td&gt;
&lt;/tr&gt;
&lt;/table&gt;</summary>
		<author><name>Caiwei</name></author>
	</entry>
	<entry>
		<id>http://micro.stanford.edu/mediawiki/index.php?title=DDLab_Input_Consistency_Check&amp;diff=693&amp;oldid=prev</id>
		<title>Caiwei: added content</title>
		<link rel="alternate" type="text/html" href="http://micro.stanford.edu/mediawiki/index.php?title=DDLab_Input_Consistency_Check&amp;diff=693&amp;oldid=prev"/>
		<updated>2007-12-18T21:59:34Z</updated>

		<summary type="html">&lt;p&gt;added content&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;DDLab has a function &amp;lt;tt&amp;gt;consistencycheck.m&amp;lt;/tt&amp;gt; that checks the self-consistency of the input dislocation structure before starting the DD simulation.  The function &amp;lt;tt&amp;gt;consistencycheck.m&amp;lt;/tt&amp;gt; is called near the very beginning of &amp;lt;tt&amp;gt;dd3d.m&amp;lt;/tt&amp;gt;&lt;br /&gt;
&lt;br /&gt;
In the version &amp;lt;tt&amp;gt;ddlab-2007-12-18.tar.gz&amp;lt;/tt&amp;gt; or newer, the &amp;lt;tt&amp;gt;consistencycheck.m&amp;lt;/tt&amp;gt; does the following checks.  Items 3, 4, 5 are general checks that are in principle necessary for any DD simulation program.  Other items are specific to the DDLab data structure and algorithm implementation.&lt;br /&gt;
&lt;br /&gt;
 1. the length of the connectivity matrix should be the same as that of links&lt;br /&gt;
&lt;br /&gt;
 2. connectivity matrix: each row correspond to a node, &lt;br /&gt;
    only the first 2*numNbrs+1 entries in each row can be non-zero&lt;br /&gt;
    where numNbrs is the number of neighbors for this node&lt;br /&gt;
&lt;br /&gt;
 3. Burgers vector conservation at every node (if flag != 7)&lt;br /&gt;
&lt;br /&gt;
 4. a node cannot be connected to another node twice&lt;br /&gt;
&lt;br /&gt;
 5. a link cannot have zero Burgers vector&lt;br /&gt;
&lt;br /&gt;
 6. a node cannot be connected to the same link twice in the connectivity matrix&lt;br /&gt;
&lt;br /&gt;
 7. consistency between &amp;quot;connectivity&amp;quot; matrix and &amp;quot;links&amp;quot; matrix&lt;br /&gt;
    if node i has a link j, then link j must have node i as one of its end nodes&lt;br /&gt;
&lt;br /&gt;
 8. check the consistency between the &amp;quot;connectivity&amp;quot; matrix and the &amp;quot;linkinconnect&amp;quot; matrix&lt;/div&gt;</summary>
		<author><name>Caiwei</name></author>
	</entry>
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